Ed's Big PlansPosts by Category
My posts are indexed by category below.
- Academic Life (48)
- 2012-02-11: SoCS Grads’ very first Wine & Cheese! (W2012)
- 2011-02-19: Midsemester Snapshot (2)
- 2010-10-02: Fall Semester 2010
- 2010-07-18: My first TA Evaluations!
- 2010-04-20: The Computational Bio & Chem Group (SOLVER Revisited)
- 2010-03-12: An Old Physiology Project — Operation Spinny Chair :D (2)
- 2010-02-28: Python Crash Course & CS[64]83 Next Directions
- 2010-02-21: iGEM*BIC — An Awesome Meeting
- 2010-01-31: Python Crash Course — 4/5ths done!
- 2010-01-25: First UWiGEM modeling meeting: Wed. Jan. 21 @6pm
- 2010-01-09: Python Crash Course – Lesson 1
- 2009-12-17: If I had a little more time… ISC 2010
- 2009-11-24: Practical Scripting for Biologists (Python)
- 2009-11-06: Back from Conference!
- 2009-11-02: IEEE BIBM09 Conference – Day 1 (4)
- 2009-10-28: Our Final iGem Wiki (2009)
- 2009-10-14: T.A.ing — half of the semester done!
- 2009-09-24: Scholarship Application Time!
- 2009-09-15: I’m a T.A. Now. (2)
- 2009-09-04: oGem Milestones and iGem
- 2009-09-04: On the Radar: oGem-Like, Workshops etc.
- 2009-08-20: New Diagram for MSc-X3 (math paper)
- 2009-08-19: Conference Paper Accepted!
- 2009-08-19: iGem Server is a Fussy Baby.
- 2009-07-27: Wrapping up at Guelph
- 2009-07-27: Meeting with Chris
- 2009-07-27: oGEM: An iGEM Story
- 2009-07-25: Waterloo T.A. Assignment!
- 2009-07-18: Near and Far Goals
- 2009-07-15: End Game — A Thesis Defence (1)
- 2009-07-10: Conference Paper Submitted
- 2009-06-25: Thesis: Preparing for Defense
- 2009-06-20: Paper Progress
- 2009-06-17: Meeting with Stefan
- 2009-06-12: Thesis Paper, Approved Draft
- 2009-06-12: Meeting with Chris
- 2009-06-12: Meeting with Stefan
- 2009-06-10: Meeting with Liz and Brendan
- 2009-06-07: Meeting with Stefan
- 2009-06-05: Meeting with Chris
- 2009-06-01: OGem – Ontario iGem Mini-Conference
- 2009-05-28: Academics
- 2009-05-22: Publication Options
- 2009-05-20: Meeting with Stefan
- 2009-05-19: NGN Experiment Dataset Treatment
- 2009-05-15: Meeting with Danielle
- 2009-05-12: Meeting with Chris Cameron
- 2009-05-10: Master’s Thesis RC-2 Submitted
- Algorithms (2)
- 2013-02-18: A Tessellation (1-, 2-, 3- unit length edges)
- 2011-12-20: Fuzzy c-means for greylevel image segmentation
- Biochemistry (6)
- 2012-07-09: Java CDK LoggingToolFactory and Reflection (Solution) (2)
- 2010-09-27: Virus capsids are pretty
- 2009-10-28: Protein Project Progress…
- 2009-10-14: Squishy TIM Barrel Subunits
- 2009-10-06: TIM Barrels look like this…
- 2009-09-24: TIM Barrels and 4-Alpha Helix Bundles
- Brain (3)
- 2011-10-10: Partial Derivatives for Residuals of the Gaussian Function
- 2011-06-01: Searching for a Continuous Bit Parity function (2)
- 2011-02-03: C & Math: Sieve of Eratosthenes with Wheel Factorization
- Canadian Healthcare (2)
- 2010-01-30: Update: General Anesthesia – Risk for Women, Canada. (1)
- 2010-01-29: General Anesthesia – Risk for Women, Canada.
- Computational Biology (32)
- 2011-12-03: My talk at Barcode of Life, Adelaide (2011)
- 2011-07-17: Reverse Complement (C Snippet) (3)
- 2011-02-27: C & Bioinformatics: ASCII Nucleotide Comparison Circuit (4)
- 2011-01-01: Simple Interactive Phylogenetic Tree Sketches JS+SVG+XHTML
- 2010-11-18: C# & Bioinformatics: Edit Strings and Local Alignment Subprofiles (2)
- 2010-10-26: BioCompiler might start life as BioCOBOL (3)
- 2010-09-01: C# & Bioinformatics: Indexers & Substitution Matrices
- 2010-08-21: C# & Bioinformatics: Align Strings to Edit Strings
- 2010-07-24: Bioinformatics: Edit Strings (Ruby, JavaScript)
- 2010-06-25: Parsing a Newick Tree with recursive descent (10)
- 2010-03-08: Idea: Delaunay Simplex Graph Grammar (2)
- 2010-02-26: Oh, right! Newick format for tree representation.
- 2010-01-13: fsMSA Algorithm Context
- 2009-12-22: fsMSA Algorithm… Monkeys in a β-Barrel…
- 2009-12-18: Early draft of TIM Barrel problem
- 2009-12-04: Neighbor Joining Revisited
- 2009-10-12: The Return of Phi C31
- 2009-09-24: Protein Databases and Parsability
- 2009-09-15: Knots were the wrong math
- 2009-09-04: DNA … Knots and Lambdas
- 2009-08-10: Rather Hashing (2)
- 2009-07-22: iGEM: Freedom Unhashed (2)
- 2009-07-03: Big Bang Day! A Recombinatron Story
- 2009-06-26: Recombinatron – DNAClass Revisited. (3)
- 2009-06-26: Operator Group Meeting
- 2009-06-25: QSAR Descriptors – Chris’ Project
- 2009-06-22: Joining UWiGEM/Modeling/Operators Team
- 2009-06-16: Yesterday and Today on UWiGem Recombinatron
- 2009-06-12: Modeling Meeting
- 2009-06-06: It’s Python for UWiGem Modeling (2)
- 2009-05-27: iGem Modeling Meeting
- 2009-05-25: Integrase Problem Introduction
- Culture (3)
- 2010-11-14: My Chinese Name (3)
- 2010-06-02: A Chess Post – S-Chess and Omega Chess (2)
- 2009-10-22: 3 Chinese Characters
- Featured (23)
- 2012-02-16: On SSL/TLS and HTTPS — Briefings for my Computer Security class (2)
- 2011-12-20: Fuzzy c-means for greylevel image segmentation
- 2011-12-03: My talk at Barcode of Life, Adelaide (2011)
- 2011-11-04: My talk at Complex Adaptive Systems, Chicago (2011)
- 2011-10-10: Partial Derivatives for Residuals of the Gaussian Function
- 2011-07-11: Exposing MATLAB data with JFrame & JTextArea
- 2011-06-29: Blog Author Clustering with SOMs
- 2011-06-16: On random initial weights (neural networks)
- 2011-03-17: SOM in Regression Data (animation) (2)
- 2011-02-27: C & Bioinformatics: ASCII Nucleotide Comparison Circuit (4)
- 2011-02-03: C & Math: Sieve of Eratosthenes with Wheel Factorization
- 2011-01-21: C# & Science: A 2D Heatmap Visualization Function (PNG)
- 2011-01-01: Simple Interactive Phylogenetic Tree Sketches JS+SVG+XHTML
- 2010-10-31: Interactive Diagrams Using Inline JS+SVG+XHTML
- 2010-07-07: The Null Coalescing Operator (C#, Ruby, JS, Python)
- 2010-06-25: Parsing a Newick Tree with recursive descent (10)
- 2010-04-07: You win again, mystery prankster! Re: QR Codes on Campus (3)
- 2010-03-12: An Old Physiology Project — Operation Spinny Chair :D (2)
- 2009-10-14: Squishy TIM Barrel Subunits
- 2009-08-20: New Diagram for MSc-X3 (math paper)
- 2009-07-12: Zinc, the Entertainment Unit (3)
- 2009-07-09: Monet Molecules c/o Autotrace (1)
- 2009-06-28: Zinc, The Surveillance System
- Life (1)
- 2011-08-28: Summer 2011 in Review
- Machine Learning (15)
- 2011-11-04: My talk at Complex Adaptive Systems, Chicago (2011)
- 2011-06-29: Blog Author Clustering with SOMs
- 2011-06-16: On random initial weights (neural networks)
- 2011-03-31: SOM Indexing Logic
- 2011-03-17: SOM in Regression Data (animation) (2)
- 2009-07-11: Convergences Detected!
- 2009-07-07: NNcmk: A Neural Network (Win32 & OSX)
- 2009-06-10: NGN Upgrade Status
- 2009-05-31: Convergence Tests
- 2009-05-21: NGN Application Areas
- 2009-05-20: More on Data Treatment
- 2009-05-18: NGN Software Updates
- 2009-05-16: Windows Basic NN Port
- 2009-05-12: Next Experiments
- 2009-05-10: Balancing and Boosting a Dataset
- Network Management (3)
- 2009-06-02: Zinc the Mac Mini (2)
- 2009-04-29: Internet Connection Sharing
- 2009-04-29: SSH, (S)FTP, VNC Tests Etc.
- Pure Markup (1)
- Pure Programming (14)
- 2011-07-11: Exposing MATLAB data with JFrame & JTextArea
- 2011-03-05: Python’s List Multiply — Use List Comprehension Instead
- 2011-02-24: The Right Tool (Why I chose Java to do RSA)
- 2010-07-07: The Null Coalescing Operator (C#, Ruby, JS, Python)
- 2010-06-27: Borrowing Ruby ideas: Returning an object instance (3)
- 2010-03-16: Brief Hints: C# Nullable Types and Arrays, Special Double Values (2)
- 2010-01-29: Generic Functions in C# and Java
- 2009-11-23: fridgelib — Andre’s C Library (3)
- 2009-11-23: Java Classpaths are Evil (2)
- 2009-11-10: 1:1 String Comparison Tool
- 2009-07-28: sqkillall.py
- 2009-07-03: Python Normalizer (Linear and Rank)
- 2009-06-25: Python EOL Converter — Windows to *Nix
- 2009-05-31: Python 2.3, 2.6 and 3.0
- Silly (3)
- 2010-07-31: Frequent typos of mine
- 2010-01-22: Fight e-mail address typos with MD5 hashes :P
- 2009-12-16: Irony is tough.
- Social Life (4)
- 2010-04-07: You win again, mystery prankster! Re: QR Codes on Campus (3)
- 2009-09-10: Hey look! Brains grow INSIDE bodies!
- 2009-08-21: Going on Honeymoon, back on 29th.
- 2009-07-29: Countdown to Wedding
- Technology (9)
- 2012-02-16: On SSL/TLS and HTTPS — Briefings for my Computer Security class (2)
- 2009-10-16: Phew! Sun Virtualbox Port Forwarding (on NAT) Solution
- 2009-09-27: Removable storage as software modules (2)
- 2009-08-19: Sun Virtualbox VM * Ubuntu: Good for us. (2)
- 2009-07-12: Zinc, the Entertainment Unit (3)
- 2009-07-09: Monet Molecules c/o Autotrace (1)
- 2009-06-30: Musical Banks — The Great Memory Debacle
- 2009-06-28: Zinc, The Surveillance System
- 2009-06-12: Upgraded Tin 2GB > 1GB > 3.3GB
- Visualizations (1)
- Web Programming (13)
- 2011-01-28: Add ‘Day/Week/Month’ to WordPress.com Stats dashboard widget
- 2010-10-31: Interactive Diagrams Using Inline JS+SVG+XHTML
- 2010-08-31: Edit number of rows shown for ‘Visitor Maps and Who’s Online’
- 2010-08-03: Wanted: Semiotics Search Tool (2)
- 2010-06-04: URL mangling for HTML forms (a better Mediawiki search box) (3)
- 2010-06-03: Add an arbitrary Mediawiki search box anywhere!
- 2010-04-23: The Journalist: A Minimalist’s WordPress Theme
- 2010-04-16: Gak! Always test your site with Google Chrome.
- 2010-03-05: Arclite Theme – Invisible Text in Submenu Fix (1)
- 2010-02-15: Logo and Title with Arclite Theme v2.02
- 2009-12-24: Project management software I want to write (1)
- 2009-12-22: Having an image logo AND logotype in Arclite (WordPress) (3)
- 2009-11-24: WordPress Inline Comments
- Website Management (17)
- 2011-12-29: Fighting spam account registration (phpBB3) (3)
- 2011-02-23: Move a Subdirectory to a Subdomain (Apache mod_alias)
- 2010-06-03: DSL Infrastructure Problems? (2)
- 2010-04-27: MAMP Solution: “Access denied for user ‘root’@’localhost’”
- 2009-12-24: Apache Optimized Finally! (Firebug, YSlow)
- 2009-12-22: New Favicon :D
- 2009-10-15: Redirection is Better!
- 2009-10-12: Yay! Domain Move Done!
- 2009-07-10: WordPress Twitter Plugin
- 2009-06-11: My first WordPress/phpBB upgrade!
- 2009-06-08: New Domain: eddiema.ca
- 2009-05-29: Snapshot & Zinc (ZnO)
- 2009-05-25: Moved WordPress to Domain Root (kind of).
- 2009-04-29: DNS Updating Issue (Final)
- 2009-04-28: SnOwy Launched
- 2009-04-26: Problem: DNS Update Malfunction
- 2009-04-26: More port forwarding, hardware etc.,
